last update : january 2015
Public data retrieved in 2014
AT5G48220 protein group
|
Protein AT5G48220
|
| Master Protein |
AT5G48220.1 |
| Description (curated) |
indole-3-glycerol phosphate synthase, putative |
| Calculated MW (PPDB) |
41.96 |
| Calculated PI (PPDB) |
5.78 |
| Length |
379 |
|
|
Curated Annotation
|
| Description (curated) |
Aldolase-type TIM barrel family protein |
| Function (curated) |
metabolism amino acids Tryptophan |
| Localization (curated) |
Ch/S |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| GGAACLSVLTDDKYFK |
1,734.81338 |
0.45 |
56.7 |
1 |
| LLEGERGELIR |
1,283.71968 |
0.27 |
41 |
2 |
| AVLVGESLIK |
1,027.62769 |
0.37 |
45.4 |
13 |
| LQNEGNTPR |
1,027.50464 |
0.13 |
52 |
7 |
| VLAIEGVELIGINNR |
1,608.91982 |
0.49 |
63.1 |
1 |
| RPPTGPPLHYVGPFEFR |
1,966.02129 |
0.38 |
36.8 |
1 |
| TGLPGLIAEVK |
1,096.64916 |
0.43 |
41.5 |
3 |
| DKEVAQMK |
979.46442 |
0.07 |
37 |
1 |
| AISTLFGR |
863.48646 |
0.36 |
42.9 |
2 |
| EDFNPVEIAQAYEK |
1,651.77290 |
0.47 |
49.5 |
1 |
| SGITEGSDSALEAK |
1,363.64665 |
0.25 |
72 |
7 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
0 |
19.14 |
80.86 |
31 |
STR-THY |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0 |
1 |
|
- |