last update : january 2015

Public data retrieved in 2014



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AT5G48220 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G48220
Master Protein AT5G48220.1
Description (curated) indole-3-glycerol phosphate synthase, putative
Calculated MW (PPDB) 41.96
Calculated PI (PPDB) 5.78
Length 379
Curated Annotation
Description (curated) Aldolase-type TIM barrel family protein
Function (curated) metabolism amino acids Tryptophan
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
AVLVGESLIK 1,027.62769 0.37 45.4 13
RPPTGPPLHYVGPFEFR 1,966.02129 0.38 36.8 1
TGLPGLIAEVK 1,096.64916 0.43 41.5 3
DKEVAQMK 979.46442 0.07 37 1
SGITEGSDSALEAK 1,363.64665 0.25 72 7
GGAACLSVLTDDKYFK 1,734.81338 0.45 56.7 1
VLAIEGVELIGINNR 1,608.91982 0.49 63.1 1
EDFNPVEIAQAYEK 1,651.77290 0.47 49.5 1
LQNEGNTPR 1,027.50464 0.13 52 7
LLEGERGELIR 1,283.71968 0.27 41 2
AISTLFGR 863.48646 0.36 42.9 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 19.14 80.86 31 STR-THY
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -