last update : january 2015

Public data retrieved in 2014



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AT5G38430 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G38430
Master Protein AT5G38430.1
Description (curated) ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B)
Calculated MW (PPDB) 20.28
Calculated PI (PPDB) 7.58
Length 181
Curated Annotation
Description (curated) RBS1B (RBCS-1B) RuBisCO small subunit 1B, chloroplast precursor (EC 4.1.1.39) /
Function (curated) metabolism carbon Calvin cycle
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
KEYPGAFIR 1,079.57632 0.28 40.8 7
YWTMWKLPLFGCTDSAQVLK 2,386.18533 0.62 39.8 1
KFETLSYLPDLTDVELAK 2,081.09318 0.50 152 65
NKWIPCVEFELEHGFVYR 2,265.10400 0.54 65.1 4
KKFETLSYLPDLTDVELAK 2,209.18814 0.45 99.3 21
EYPGAFIR 951.48137 0.34 51.2 52
WIPCVEFELEHGFVYR 2,022.96612 0.58 111.3 5
NKWIPCVEFELEHGFVYR 2,313.08874 0.51 44 1
EHGNTPGYYDGR 1,364.57449 0.18 100.6 105
LPLFGCTDSAQVLK 1,490.78026 0.49 117.9 9
EVEECKKEYPGAFIR 1,844.86137 0.30 79.5 74
FETLSYLPDLTDVELAK 1,952.99823 0.56 131.8 43
QVQCISFIAYKPPSFTDA 2,061.97170 0.54 64 24
EVEECKK 911.39056 0.04 36.9 18
LPLFGCTDSAQVLK 1,538.76500 0.53 103.7 173
LPLFGCTDSAQVLKEVEECKK 2,432.14500 0.49 134.7 6
WIPCVEFELEHGFVYR 2,070.95087 0.58 87.1 37
KFETLSYLPDLTDVELAKEVDYLLR 2,969.56368 0.59 58.7 2
IIGFDNTR 934.48720 0.38 67.2 217
EHGNTPGYYDGRYWTMWK 2,259.97957 0.43 37.4 3
EVDYLLR 906.48105 0.36 45.4 33
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 18.9 4.41 76.69 851 STR-ENV
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 2.31764 0 LAM_high