last update : january 2015

Public data retrieved in 2014



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AT5G28500 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G28500
Master Protein AT5G28500.1
Description (curated) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65032.1)
Calculated MW (PPDB) 48.23
Calculated PI (PPDB) 4.98
Length 434
Curated Annotation
Description (curated) RAF1 Rubisco accumulation factor 1 putative
Function (curated) unknown
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
QQLYQPFRPPPSPIPPK 1,989.08359 0.36 36.8 1
GVNESLGMVVLVVRPPR 1,837.02429 0.43 51.5 2
GEAIMVVIDR 1,133.57501 0.34 66.3 2
ELHGESEEER 1,213.52106 0.13 68.4 10
SLDTAGKIEVLADR 1,486.79907 0.32 68.5 4
IIRVPVVR 950.63887 0.26 27 3
GVNESLGMVVLVVRPPR 1,853.01921 0.45 53.2 1
IEVLADR 814.45483 0.26 34.8 3
LLNTTQR 844.47665 0.17 50.7 7
GAGDLAR 658.33980 0.12 42.7 3
AIKDFPHR 982.53482 0.17 36.3 1
VAAAEYIVDHGFDTK 1,634.79398 0.39 97.6 9
TTLLEQALETAVTEK 1,645.87740 0.56 118.1 28
GEAIMVVIDR 1,117.58009 0.34 47.8 2
TVEADNGYYYLVVADGGMK 2,095.94075 0.44 103.9 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 0 100 73 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -