last update : january 2015
Public data retrieved in 2014
AT5G26742 protein group
|
Protein AT5G26742
|
| Master Protein |
AT5G26742.1 |
| Description (curated) |
EMB1138 (EMBRYO DEFECTIVE 1138); ATP binding / ATP-dependent helicase |
| Calculated MW (PPDB) |
81 |
| Calculated PI (PPDB) |
7.24 |
| Length |
747 |
|
|
Curated Annotation
|
| Description (curated) |
RH3 (EMB1138) EMBRYO DEFECTIVE 1138, DEAD box ATP-dependent RNA helicase (EC 3.6.1.-) / |
| Function (curated) |
RNA Binding ? |
| Localization (curated) |
Ch/S & Ch/E |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| TILSDLITVYAK |
1,335.76494 |
0.56 |
54.5 |
2 |
| EGSAILMHTSSQK |
1,419.66637 |
0.19 |
58.3 |
4 |
| GVDVVVGTPGR |
1,054.57704 |
0.27 |
83.3 |
11 |
| FLVLAPTR |
915.55415 |
0.36 |
51.4 |
6 |
| IQGAVFDLPEEIAK |
1,528.81364 |
0.48 |
70.9 |
1 |
| LYAIATTSTSK |
1,154.61829 |
0.26 |
28.6 |
1 |
| LTEEAGDYTAFR |
1,371.63062 |
0.34 |
71.4 |
2 |
| SVTGFLSDLYR |
1,256.64006 |
0.49 |
46.2 |
2 |
| YLDNPLNIDLVGDQDEK |
1,959.94250 |
0.50 |
47.4 |
1 |
| AVLVPALQGR |
1,022.62361 |
0.35 |
36.6 |
8 |
| IFLIADDR |
961.52325 |
0.38 |
37.1 |
2 |
| IIDLIEGR |
927.53890 |
0.37 |
50.4 |
10 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
41 |
0 |
59 |
38 |
STR-ENV |
| Reference of the experiment |
Reference date |
Sample CAM Binding Protein |
| cam_bp |
2013-01-01 00:00:00 CET |
Arabidopsis_stroma; |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
-1.05538 |
0.0045 |
|
BBY_high |