last update : january 2015

Public data retrieved in 2014



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AT5G26742 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G26742
Master Protein AT5G26742.1
Description (curated) EMB1138 (EMBRYO DEFECTIVE 1138); ATP binding / ATP-dependent helicase
Calculated MW (PPDB) 81
Calculated PI (PPDB) 7.24
Length 747
Curated Annotation
Description (curated) RH3 (EMB1138) EMBRYO DEFECTIVE 1138, DEAD box ATP-dependent RNA helicase (EC 3.6.1.-) /
Function (curated) RNA Binding ?
Localization (curated) Ch/S & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
LTEEAGDYTAFR 1,371.63062 0.34 71.4 2
TILSDLITVYAK 1,335.76494 0.56 54.5 2
IFLIADDR 961.52325 0.38 37.1 2
YLDNPLNIDLVGDQDEK 1,959.94250 0.50 47.4 1
GVDVVVGTPGR 1,054.57704 0.27 83.3 11
IQGAVFDLPEEIAK 1,528.81364 0.48 70.9 1
FLVLAPTR 915.55415 0.36 51.4 6
EGSAILMHTSSQK 1,419.66637 0.19 58.3 4
IIDLIEGR 927.53890 0.37 50.4 10
AVLVPALQGR 1,022.62361 0.35 36.6 8
SVTGFLSDLYR 1,256.64006 0.49 46.2 2
LYAIATTSTSK 1,154.61829 0.26 28.6 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 41 0 59 38 STR-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST -1.05538 0.0045 BBY_high