last update : january 2015

Public data retrieved in 2014



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AT1G03475 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G03475
Master Protein AT1G03475.1
Description (curated) LIN2 (LESION INITIATION 2); coproporphyrinogen oxidase
Calculated MW (PPDB) 40.76
Calculated PI (PPDB) 7.66
Length 362
Curated Annotation
Description (curated) HEM6 (CPO, LIN2) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) /
Function (curated) metabolism vitamin and pigment
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
KDMEFTEQHK 1,307.58157 0.11 43.1 3
DMEFTEQHK 1,195.48154 0.17 40.4 8
HFHSIQK 895.46642 0.14 28 2
YVEFNLVYDR 1,316.64004 0.44 60.5 6
AGVNVSVVYGVMPPEAYR 1,938.95085 0.42 90.9 4
ARFETMIR 1,054.52293 0.23 45.5 14
FDPSFYPR 1,027.47630 0.36 52.6 8
EVPETERPFTFLR 1,619.83070 0.39 37.8 2
NPFAPTLHFNYR 1,475.73094 0.39 53.9 8
KDMEFTEQHK 1,323.57649 0.12 63.7 20
DMEFTEQHK 1,179.48662 0.16 22.5 1
FKEDVWSR 1,065.52431 0.29 42.2 3
PGGGGGISR 756.38779 0.11 62.2 5
AGVNVSVVYGVMPPEAYR 1,922.95593 0.42 66.7 2
RKDMEFTEQHK 1,479.67760 0.11 50.4 9
YFETDAPK 969.44434 0.24 51.7 5
DSDDVTPSSSSSSVR 1,524.65396 0.19 108.4 45
QACDKFDPSFYPR 1,620.68782 0.37 63.8 11
VLQDGNVFEK 1,147.58728 0.30 73.2 39
AAQDSVCDAIEAIEGGPK 1,820.80975 0.51 107.9 10
GTTFGLK 722.39626 0.26 33 4
YFETDAPKDVPGAPR 1,661.80489 0.29 66.5 2
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 6.59 0 93.41 194 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -