last update : january 2015

Public data retrieved in 2014



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AT5G23120 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G23120
Master Protein AT5G23120.1
Description (curated) HCF136 (High chlorophyll fluorescence 136)
Calculated MW (PPDB) 44.1
Calculated PI (PPDB) 6.79
Length 403
Curated Annotation
Description (curated) P2SAF (HCF136) Photosystem II stability/assembly factor, HIGH CHLOROPHYLL FLUORESCENCE 136, chloroplast precursor /
Function (curated) chaperone and protease ?
Localization (curated) Ch/Th & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
FNSISFK 841.43336 0.31 42.7 4
KGFVLGNDGVLLR 1,386.79825 0.39 95.3 6
GGGLYLSK 793.43335 0.25 52.7 2
SIPSAEEEDFNYR 1,555.67902 0.34 91.8 11
GFVLGNDGVLLR 1,258.70329 0.45 93.4 13
IPLSSQLPGDMVFIK 1,675.88545 0.45 59.3 7
SAEMVTDEGAIYVTSNR 1,873.83632 0.34 99.6 4
IPLSSQLPGDMVFIK 1,659.89053 0.45 64.5 2
QTLLETK 831.47017 0.23 42.6 3
GFGILDVGYR 1,095.57123 0.46 76.6 6
VFLPIDPGVVLLDIAFVPDEPSR 2,507.36748 0.70 93.8 10
GTGITEEFEEVPVQSR 1,776.85294 0.39 91.1 22
ATEDKSAEMVTDEGAIYVTSNR 2,418.08560 0.35 125.4 5
DKAADNIAANLYAVK 1,575.82561 0.36 64.3 5
YVAVSSR 780.41296 0.16 27.2 1
GFLLGTR 762.43878 0.34 41.2 3
AAIQETVSATLNR 1,372.73100 0.34 81.2 8
AADNIAANLYAVK 1,332.70370 0.37 63.2 5
FVDDKKGFVLGNDGVLLR 1,991.08391 0.40 101.9 9
ADGGLWLLVR 1,098.61853 0.52 43.9 1
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 16.84 82.64 0.53 124 THY-ENV
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_membranes;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 3.57357 0 LAM_high