last update : january 2015

Public data retrieved in 2014



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AT5G22800 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G22800
Master Protein AT5G22800.1
Description (curated) EMB1030 (EMBRYO DEFECTIVE 1030); ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleic acid binding
Calculated MW (PPDB) 107.83
Calculated PI (PPDB) 5.42
Length 978
Curated Annotation
Description (curated) Probable alanine--tRNA ligase
Function (curated) translation stroma
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
IAQILQK 812.51196 0.24 48.8 5
TEDGLLEPLK 1,113.59172 0.38 30.6 1
NIDTGLGLER 1,086.56690 0.32 62 13
VVGQETSQAGSLVAFDR 1,762.88490 0.37 104.2 14
IISEQGIASGIR 1,242.69315 0.34 88.8 17
LCGGGGGGKPNFAQAGGR 1,650.75313 0.24 59.7 5
FDFNFNR 958.42967 0.40 41.9 4
AFTVGTSQTIR 1,179.62476 0.29 59.9 15
VPNNYETDLIYPIIAK 1,861.98251 0.50 56.9 1
VLPLADAKR 981.59708 0.23 23.4 1
LTVEDDADMTK 1,268.54420 0.23 60.6 12
FLEFFASR 1,015.51266 0.46 45.1 6
KPENLPSALEK 1,224.67136 0.24 49.1 4
AVVEVSDVQK 1,072.57638 0.23 64.2 11
VENLLEELR 1,113.60294 0.45 43 3
VLVESMDDTDADSLK 1,668.73999 0.30 101.6 7
AVVYLISDGVSPSNIGR 1,745.93112 0.43 49.2 1
TNDLENVGK 988.48250 0.21 54.3 2
LNDALSIADK 1,058.56076 0.30 39.9 3
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 0 100 117 STR
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 0 1 -