last update : january 2015
Public data retrieved in 2014
AT1G20020 protein group
|
Protein AT1G20020
|
| Master Protein |
AT1G20020.1 |
| Description (curated) |
ATLFNR2 (LEAF FNR 2); NADPH dehydrogenase/ oxidoreductase/ poly(U) binding |
| Calculated MW (PPDB) |
41.16 |
| Calculated PI (PPDB) |
8.5 |
| Length |
369 |
|
|
Curated Annotation
|
| Description (curated) |
FNR2 Ferredoxin-NADP reductase 2, chloroplast precursor (EC 1.18.1.2) / |
| Function (curated) |
redox |
| Localization (curated) |
Ch/S & Ch/Th |
| Localization (validated) |
Yes
|
| References |
|
| Curated Protein Name |
|
| Publication (PPDB) |
|
|
|
Peptides
|
| Sequence |
Monoisotopic mass |
Retention Time |
Score |
Observed MS/MS count |
| AKAPENFR |
931.48752 |
0.16 |
41.4 |
11 |
| KDNTFVYMCGLK |
1,497.64792 |
0.34 |
93 |
6 |
| DNTFVYMCGLK |
1,369.55296 |
0.42 |
70.4 |
6 |
| EGQSVGVIADGIDKNGKPHK |
2,048.06497 |
0.24 |
64.7 |
2 |
| VSKKNEEGVIVNR |
1,470.81535 |
0.15 |
74 |
5 |
| DPNATVIMLATGTGIAPFR |
1,960.00874 |
0.54 |
98.1 |
17 |
| YRPKEPYTGK |
1,237.64548 |
0.16 |
39.4 |
3 |
| ITADDAPGETWHMVFSHQGEIPYR |
2,756.26524 |
0.46 |
61.9 |
3 |
| KAEQWNVEVY |
1,264.60875 |
0.38 |
40 |
9 |
| EPYTGKCLLNTK |
1,413.68094 |
0.31 |
53.2 |
4 |
| MAQYAAELWELLKK |
1,692.89085 |
0.57 |
48.5 |
4 |
| DNTFVYMCGLKGMEK |
1,830.74736 |
0.35 |
55.4 |
4 |
| GVCSNFLCDLAPGSDVK |
1,819.76036 |
0.56 |
84.3 |
5 |
| EMLMPKDPNATVIMLATGTGIAPFR |
2,673.36916 |
0.59 |
32.9 |
1 |
| LTGPVGK |
670.40134 |
0.16 |
27.4 |
3 |
| DNTFVYMCGLKGMEK |
1,846.74228 |
0.37 |
103.3 |
15 |
| GIDDIMVSLAANDGIDWFDYKK |
2,485.18346 |
0.64 |
65.4 |
2 |
| KDNTFVYMCGLK |
1,481.65300 |
0.32 |
76.1 |
2 |
| EGQSVGVIADGIDK |
1,386.69900 |
0.32 |
92.4 |
35 |
| ITADDAPGETWHMVFSHQGEIPYR |
2,772.26016 |
0.42 |
62.9 |
1 |
| MAQYAAELWELLK |
1,580.79082 |
0.59 |
99.3 |
13 |
| DPNATVIMLATGTGIAPFR |
1,976.00366 |
0.54 |
104.4 |
32 |
| NEEGVIVNR |
1,028.52501 |
0.22 |
70.5 |
61 |
| VDYAISR |
822.42354 |
0.23 |
53.9 |
32 |
| RLVYTNDQGETVK |
1,521.77867 |
0.22 |
101.8 |
6 |
| MFFEKHDDYK |
1,390.58632 |
0.23 |
45.7 |
3 |
| KDNTFVYMCGLKGMEK |
1,974.83723 |
0.31 |
88.3 |
2 |
| DNTFVYMCGLK |
1,353.55804 |
0.38 |
63.2 |
2 |
| EQANDKGEK |
1,017.47266 |
0.03 |
70.6 |
15 |
| DPNATVIMLATGTGIAPFR |
1,944.01382 |
0.58 |
66.2 |
3 |
| KNEEGVIVNR |
1,156.61996 |
0.18 |
88.5 |
114 |
| LTGPVGKEMLMPK |
1,463.73634 |
0.25 |
64.8 |
9 |
| AQITTETDTPTPAK |
1,472.73586 |
0.22 |
74.9 |
3 |
| APENFRVDYAISR |
1,536.76843 |
0.34 |
58.7 |
2 |
| MAQYAAELWELLK |
1,596.78574 |
0.57 |
37.5 |
1 |
| MAQYAAELWELLK |
1,564.79590 |
0.61 |
90.8 |
5 |
| LVYTNDQGETVK |
1,365.67757 |
0.24 |
81.6 |
67 |
| Reference of the experiment |
Reference date |
score % of enveloppe |
score % of thylakoïd |
score % of stroma |
Total spectral count |
Localization Score |
| at_chloro_v1 |
2010 06 |
10.74 |
32.38 |
56.88 |
498 |
STR-THY |
| Reference of the experiment |
Reference date |
Sample CAM Binding Protein |
| cam_bp |
2013-01-01 00:00:00 CET |
Arabidopsis_membranes; |
| Reference of the experiment |
Reference date |
Log Fold Change |
pValue |
Curated Protein Complex Classes |
Differentially distributed proteins high or medium |
| thylakoïd_sub_compartments |
2013-10-01 00:00:00 CEST |
0.47658 |
0.00243 |
|
LAM_medium |