last update : january 2015

Public data retrieved in 2014



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AT5G08740 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT5G08740
Master Protein AT5G08740.1
Description (curated) NDC1 (NAD(P)H DEHYDROGENASE C1); NADH dehydrogenase
Calculated MW (PPDB) 56.85
Calculated PI (PPDB) 6.51
Length 519
Curated Annotation
Description (curated) DhnA-like NAD(P)H DEHYDROGENASE C1, pyridine nucleotide-disulphide oxidoreductase family protein (EC 1.6.-.-), chloroplast and mitochondria precursor /
Function (curated) redox ? metabolism nucleotide ?
Localization (curated) Ch/Th & Ch/E
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
SAVDSIALLQSNLTK 1,558.85660 0.48 78.1 1
NILTSAPDGNR 1,156.58362 0.27 43 2
AVTNNSGTTEISDNETAPR 1,975.90825 0.24 99.6 1
GIVQSINVSK 1,043.59746 0.30 49.7 1
FQNLGEMMTLGR 1,459.64351 0.35 56.3 1
KPQVVLVDQSER 1,396.76738 0.24 46.2 1
LEPSGPNVLPLNAR 1,475.80957 0.37 41.4 2
GQAETDETLR 1,118.52036 0.18 61.9 3
IFALGDSSSLR 1,164.61385 0.39 76.3 3
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 13.78 86.22 0 15 THY
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST 2.74721 0.00001 LAM_high