last update : january 2015

Public data retrieved in 2014



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AT1G01080 protein group

See also TAIR PPDB AtProteome SUBA POGs Aramemnon
Protein AT1G01080
Master Protein AT1G01080.1
Description (curated) 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative
Calculated MW (PPDB) 32.57
Calculated PI (PPDB) 9
Length 293
Curated Annotation
Description (curated) HP32d conserved plant protein containing RNA-binding (RRM/RBD/RNP) motifs, chloroplast precursor /
Function (curated) RNA binding ?
Localization (curated) Ch/S
Localization (validated) Yes
References
Curated Protein Name
Publication (PPDB)
Peptides
Sequence Monoisotopic mass Retention Time Score Observed MS/MS count
FGTIVSTR 879.48138 0.27 53.7 5
IAIASLDGTEVGGREMR 1,805.89409 0.32 35.3 1
YSVDMNPGTR 1,170.49751 0.23 35.1 3
IAIASLDGTEVGGR 1,357.72008 0.37 91.5 8
RNPEVLNSTPK 1,253.67276 0.20 54.8 9
NPEVLNSTPK 1,097.57166 0.22 51 4
Reference of the experiment Reference date score % of enveloppe score % of thylakoïd score % of stroma Total spectral count Localization Score
at_chloro_v1 2010 06 0 0 100 26 STR
Reference of the experiment Reference date Sample CAM Binding Protein
cam_bp 2013-01-01 00:00:00 CET Arabidopsis_stroma;
Reference of the experiment Reference date Log Fold Change pValue Curated Protein Complex Classes Differentially distributed proteins high or medium
thylakoïd_sub_compartments 2013-10-01 00:00:00 CEST -0.45877 0.1244 -