last update : january 2015

Public data retrieved in 2014

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Thylakoid protein groups list (220)

Accession Master Protein Description (curated) Length Localization (curated) Calculated Pi PPDB Calculated MW PPDB Function (putative) MapManBin (PPDB) Localization (TAIR) ChloroP TargetP Curated localization (PPDB) Aramemnon
AT5G42270 AT5G42270.1 VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase 704 Ch/Th & Ch/E 5.36 75.23 chaperone and protease 29.5.7 protein.degradation.metalloprotease thylakoid membrane (sensu Viridiplantae) & chloroplast plastid plastid thylakoid-integral
AT5G42650 AT5G42650.1 AOS (ALLENE OXIDE SYNTHASE); hydro-lyase/ oxygen binding 518 Ch/E & Ch/Th 8.75 58.19 metabolism hormone jasmonate hormone metabolism.jasmonate.synthesis-degradation.allene oxidase synthase thylakoid membrane (sensu Viridiplantae) & mitochondrion plastid thylakoid
AT5G46110 AT5G46110.1 APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); antiporter/ triose-phosphate transmembrane transporter 410 Ch/E & Ch/Th 9.75 44.63 transporter Pi/TP 34.8 transport.metabolite transporters at the envelope membrane mitochondrion envelope-inner-integral
AT5G48220 AT5G48220.1 indole-3-glycerol phosphate synthase, putative 379 Ch/S 5.78 41.96 metabolism amino acids Tryptophan amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase plastid plastid plastid stroma
AT5G48790 AT5G48790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49997.1) 316 Ch/Th & Ch/E 8.12 35.86 unknown 35.2 not assigned.unknown plastid plastid thylakoid
AT5G51545 AT5G51545.1 LPA2 (LOW PSII ACCUMULATION2) 185 Ch/Th 9.34 20.21 chaperone and protease 35.2 not assigned.unknown plastid thylakoid-integral
AT5G52440 AT5G52440.1 HCF106 (High chlorophyll fluorescence 106) 260 Ch/E & Ch/Th 8.92 28.23 protein targeting 29.3.3 protein.targeting.chloroplast thylakoid & thylakoid membrane (sensu Viridiplantae) plastid plastid thylakoid-integral 1
AT5G53490 AT5G53490.1 thylakoid lumenal 17.4 kDa protein, chloroplast 236 Ch/Th & Ch/E & Ch/S 5.97 25.64 RNA Binding ? 27.7* RNA.misc.pentatricopeptide (PPR) repeat-containing protein plastid thylakoid-peripheral-lumenal-side
AT5G54190 AT5G54190.1 PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase 405 Ch/E & Ch/Th 9.42 43.86 metabolism vitamin and pigment 19.14 tetrapyrrole synthesis.protochlorophyllide reductase chloroplast Y C thylakoid-peripheral-stromal-side
AT5G54270 AT5G54270.1 LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3) 265 Ch/Th 4.96 28.7 PS LHCII PS.lightreaction.photosystem II.LHC-II thylakoid membrane (sensu Viridiplantae) plastid plastid thylakoid-integral 2