last update : january 2015

Public data retrieved in 2014

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Thylakoid protein groups list (220)

Accession Master Protein Description (curated) Length Localization (curated) Calculated Pi PPDB Calculated MW PPDB Function (putative) MapManBin (PPDB) Localization (TAIR) ChloroP TargetP Curated localization (PPDB) Aramemnon
AT4G35250 AT4G35250.1 vestitone reductase-related 395 Ch/Th 8.7 43.72 protein targeting ? 35.1 not ontology plastid plastid thylakoid
AT4G37930 AT4G37930.1 SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding 517 Ch/Th & Ch/S 8.12 57.4 unknown 25.1 C1-metabolism.glycine hydroxymethyltransferase mitochondrion mitochondrion mitochondria
AT4G39260 AT4G39260.1 ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8); RNA binding 169 Ch/Th 5.57 16.57 RNA Binding 27.3.75 RNA.regulation of transcription.GRP nucleus
AT5G01530 AT5G01530.1 chlorophyll A-B binding protein CP29 (LHCB4) 290 Ch/Th 5.76 31.14 PS LHCII PS.lightreaction.photosystem II.LHC-II thylakoid membrane (sensu Viridiplantae) plastid plastid thylakoid-integral 2
AT5G03880 AT5G03880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10000.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15903.1); contains InterPro domain Thioredoxin-like 339 Ch/E & Ch/Th 9.01 37.04 redox ? 21.4 redox.glutaredoxins thylakoid membrane (sensu Viridiplantae) plastid thylakoid 2
AT5G08050 AT5G08050.1 similar to unnamed protein product [Vitis vinifera] (GB:CAO62462.1); similar to unknown [Populus trichocarpa] (GB:ABK95457.1); contains InterPro domain Protein of unknown function DUF1118 (InterPro:IPR009500); contains InterPro domain Uncharacterised 158 Ch/Th 9.3 16.58 unknown 35.2 not assigned.unknown thylakoid membrane (sensu Viridiplantae) plastid plastid thylakoid 2
AT5G08680 AT5G08680.1 ATP synthase beta chain, mitochondrial, putative 559 other 6.06 59.86 transporter ATPase 9.9 mitochondrial electron transport / ATP synthesis.F1-ATPase undefined Y M mitochondria
AT5G08740 AT5G08740.1 NDC1 (NAD(P)H DEHYDROGENASE C1); NADH dehydrogenase 519 Ch/Th & Ch/E 6.51 56.85 redox ? metabolism nucleotide ? 21 redox intrinsic to mitochondrial inner membrane plastid mitochondria; plastoglobules
AT5G09660 AT5G09660.1 PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2); malate dehydrogenase 354 na 8.14 37.37 metabolism carbon 6.3 gluconeogenesis.Malate DH peroxisome
AT5G10160 AT5G10160.1 beta-hydroxyacyl-ACP dehydratase, putative 219 Ch/Th & Ch/E 9.32 24.12 metabolism lipid 11.1.5 lipid metabolism.FA synthesis and FA elongation.beta hydroxyacyl ACP dehydratase plastid plastid plastid stroma