last update : january 2015

Public data retrieved in 2014



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Thylakoid protein groups list (220)


Accession Master Protein Description (curated) Length Localization (curated) Calculated Pi PPDB Calculated MW PPDB Function (putative) MapManBin (PPDB) Localization (TAIR) ChloroP TargetP Curated localization (PPDB) Aramemnon
AT3G53460 AT3G53460.1 CP29 (chloroplast 29 kDa ribonucleoprotein); RNA binding / poly(U) binding 342 Ch/Th & Ch/S 5.24 36 RNA Binding 27.4 RNA.RNA binding plastid plastid plastid stroma
AT3G54890 AT3G54890.1 LHCA1; chlorophyll binding 241 Ch/Th 6.21 25.99 PS LHCI 1.1.2.1 PS.lightreaction.photosystem I.LHC-I plastid plastid thylakoid-integral
AT3G56650 AT3G56650.1 thylakoid lumenal 20 kDa protein 262 Ch/Th & Ch/S 9.29 28.63 PS PSII OEE ? 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits thylakoid lumen (sensu Viridiplantae) plastid plastid thylakoid-peripheral-lumenal-side
AT3G56940 AT3G56940.1 AT103 (DICARBOXYLATE DIIRON 1) 409 Ch/E & Ch/Th 8.55 47.63 metabolism vitamin and pigment 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase thylakoid membrane (sensu Viridiplantae) & chloroplast inner membrane plastid plastid envelope-inner-peripheral-stromal-side; thylakoid-peripheral-stromal-side
AT3G57560 AT3G57560.1 aspartate/glutamate/uridylate kinase family protein 347 Ch/Th 9.04 36.59 unknown 13.1.2.3.2 amino acid metabolism.synthesis.glutamate family.arginine.acetylglutamate kinase chloroplast plastid plastid plastid stroma
AT3G59780 AT3G59780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46311.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) 610 Ch/Th 4.55 65.33 unknown 35.2 not assigned.unknown mitochondrion thylakoid 3
AT3G61470 AT3G61470.1 LHCA2 (Photosystem I light harvesting complex gene 2); chlorophyll binding 257 Ch/Th 6.9 27.78 PS LHCI 1.1.2.1 PS.lightreaction.photosystem I.LHC-I thylakoid membrane (sensu Viridiplantae) & photosystem I antenna complex plastid plastid thylakoid-integral
AT3G61870 AT3G61870.1 similar to unknown [Populus trichocarpa] (GB:ABK95718.1) 272 Ch/Th & Ch/E 9.34 29.58 unknown 35.2 not assigned.unknown chloroplast inner membrane plastid plastid plastid 4
AT3G63140 AT3G63140.1 mRNA-binding protein, putative 406 Ch/S & Ch/Th & Ch/E 8.54 43.93 RNA Binding 27.3.99 RNA.regulation of transcription.unclassified plastid plastid plastid stroma
AT4G01050 AT4G01050.1 hydroxyproline-rich glycoprotein family protein 466 Ch/Th 5.21 49.38 chaperone and protease ? 26.23 misc.rhodanese thylakoid membrane (sensu Viridiplantae) plastid plastid thylakoid 2