last update : january 2015

Public data retrieved in 2014



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Thylakoid protein groups list (220)


Accession Master Protein Description (curated) Length Localization (curated) Calculated Pi PPDB Calculated MW PPDB Function (putative) MapManBin (PPDB) Localization (TAIR) ChloroP TargetP Curated localization (PPDB) Aramemnon
ATCG00580 AtCg00580 PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through 83 Ch/Th 4.83 9.39 PS PSII 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits undefined C thylakoid-integral
ATCG00680 AtCg00680 encodes for CP47, subunit of the photosystem II reaction center. 508 Ch/Th 6.39 56.03 PS PSII 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits undefined C thylakoid-integral
ATCG00710 AtCg00710 Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and Q 73 6.03 7.7 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits undefined C thylakoid-integral
ATCG00720 AtCg00720 Encodes the cytochrome b(6) subunit of the cytochrome b6f complex. 215 Ch/Th 8.88 24.15 PS b6-F 1.1.3 PS.lightreaction.cytochrome b6/f other (e.g. cytoplasm) C thylakoid-integral
ATCG00730 AtCg00730 A chloroplast gene encoding subunit IV of the cytochrome b6/f complex 160 Ch/Th 6.55 17.43 PS b6-F 1.1.3 PS.lightreaction.cytochrome b6/f other (e.g. cytoplasm) C thylakoid-integral
ATCG00740 AtCg00740 RNA polymerase alpha subunit 329 7.19 38.13 27.2 RNA.transcription undefined C plastid stroma
ATCG00780 AtCg00780 encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex 122 Ch/S 9.38 13.58 translation stroma plastid large ribosomal subunit - C plastid ribosome
ATCG01060 AtCg01060 Encodes the PsaC subunit of photosystem I. 81 Ch/Th 6.67 9.03 PS PSI 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits undefined C thylakoid-peripheral-stromal-side
ATCG01070 AtCg01070 NADH dehydrogenase ND4L 101 8.73 11.28 1.1.6 PS.lightreaction.NADH DH secreted C thylakoid-integral
ATCG01110 AtCg01110 Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4. 393 5.39 45.5 1.1.6 PS.lightreaction.NADH DH undefined C thylakoid