last update : january 2015

Public data retrieved in 2014

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Grana/Stroma-Lamellae protein groups list (1290)

Accession Master Protein Description (curated) Length Localization (curated) Calculated Pi PPDB Calculated MW PPDB Function (putative) MapManBin (PPDB) Localization (TAIR) ChloroP TargetP Curated localization (PPDB) Aramemnon
AT1G07320 AT1G07320.3 RPL4 (ribosomal protein L4); poly(U) binding / structural constituent of ribosome 282 Ch/S & Ch/E 8.92 30.55 translation stroma protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4 thylakoid membrane (sensu Viridiplantae) & plastid large ribosomal subunit plastid plastid plastid ribosome
AT1G08380 AT1G08380.1 PSAO (photosystem I subunit O) 140 Ch/Th 9.77 15.14 PS PSI PS.lightreaction.photosystem I.PSI polypeptide subunits plastid plastid thylakoid-integral 2
AT1G08520 AT1G08520.1 CHLD/PDE166 (PIGMENT DEFECTIVE 166); magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding 760 Ch/Th & Ch/S 5.26 83.28 metabolism vitamin and pigment 19.10 tetrapyrrole synthesis.magnesium chelatase magnesium chelatase complex plastid plastid plastid
AT1G08530 AT1G08530.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09995.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09995.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO70794.1) 257 Ch/E/IM 7.72 27.01 unknown 35.2 not assigned.unknown plastid plastid 1
AT1G08550 AT1G08550.1 NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1) 462 Ch/Th 5.18 52.01 metabolism vitamin and pigment carotenoids secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase thylakoid lumen (sensu Viridiplantae) & photosystem II (sensu Viridiplantae) thylakoid-peripheral-lumenal-side
AT1G08640 AT1G08640.1 heat shock protein binding 294 Ch/E/IM 9.82 32.9 chaperone and protease 26.29* misc.DnaJ domain with unknown function plastid plastid envelope-inner-integral 3
AT1G09130 AT1G09130.1 ATP-dependent Clp protease proteolytic subunit, putative 330 Ch/E & Ch/S 8.63 36.3 chaperone and protease 29.5.5 protein.degradation.serine protease mitochondrion & chloroplast stroma plastid plastid plastid stroma
AT1G09340 AT1G09340.1 CRB; binding / catalytic/ coenzyme binding 378 Ch/S ?? & Ch/Th ?? & Ch/E ?? 8.18 42.62 RNA Binding 27 RNA cytosol; plastid stroma
AT1G09795 AT1G09795.1 ATATP-PRT2 (ATP PHOSPHORIBOSYL TRANSFERASE 2); ATP phosphoribosyltransferase 413 Ch/S 6.34 44.75 metabolism amino acids Histidine amino acid metabolism.synthesis.histidine.ATP phosphoribosyl transferase plastid plastid plastid stroma
AT1G10510 AT1G10510.1 EMB2004 (EMBRYO DEFECTIVE 2004); protein binding 605 Ch/E/IM 7.18 64.72 RNA metabolism? 33.99 development.unspecified chloroplast envelope plastid plastid plastid 1