last update : january 2015
Public data retrieved in 2014
Accession | Master Protein | Description (curated) | Length | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ATCG00670 | AtCg00670 | Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described i | 196 | Ch/E & Ch/S | 4.97 | 22.09 | chaperone and protease | 29.5.5 protein.degradation.serine protease | other (e.g. cytoplasm) | C | plastid stroma; thylakoid-inner-peripheral-stromal-side | ||
ATCG00740 | AtCg00740 | RNA polymerase alpha subunit | 329 | 7.19 | 38.13 | 27.2 RNA.transcription | undefined | C | plastid stroma | ||||
ATCG00750 | AtCg00750 | 30S chloroplast ribosomal protein S11 | 138 | Ch/S | 12.24 | 15.02 | translation stroma | plastid small ribosomal subunit | Y | C | plastid ribosome | ||
ATCG00760 | AtCg00760 | encodes a chloroplast ribosomal protein L36, a constituent of the large subunit of the ribosomal complex | 37 | Ch/S | 11.91 | 4.46 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
ATCG00770 | AtCg00770 | chloroplast 30S ribosomal protein S8 | 134 | Ch/S | 10.93 | 15.48 | translation stroma | plastid small ribosomal subunit | - | C | plastid ribosome | ||
ATCG00780 | AtCg00780 | encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex | 122 | Ch/S | 9.38 | 13.58 | translation stroma | plastid large ribosomal subunit | - | C | plastid ribosome | ||
ATCG00790 | AtCg00790 | chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit | 135 | Ch/S | 11.62 | 15.29 | translation stroma | plastid large ribosomal subunit | - | C | plastid ribosome | ||
ATCG00800 | AtCg00800 | encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex | 218 | Ch/S | 9.51 | 25.18 | translation stroma | plastid small ribosomal subunit & chloroplast | - | C | plastid ribosome | ||
ATCG00810 | AtCg00810 | encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex | 160 | Ch/S | 9.69 | 18.58 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
ATCG00820 | AtCg00820 | Encodes a 6.8-kDa protein of the small ribosomal subunit. | 92 | Ch/S | 10.77 | 10.57 | translation stroma | plastid small ribosomal subunit & plastid ribosome | - | C | plastid ribosome |