last update : january 2015
Public data retrieved in 2014
Accession | Master Protein | Description (curated) | Length | Localization (curated) | Calculated Pi PPDB | Calculated MW PPDB | Function (putative) | MapManBin (PPDB) | Localization (TAIR) | ChloroP | TargetP | Curated localization (PPDB) | Aramemnon |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ATCG00350 | AtCg00350 | Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome. | 750 | Ch/Th | 6.6 | 83.23 | PS PSI | 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits | other (e.g. cytoplasm) | C | thylakoid-integral | ||
ATCG00470 | AtCg00470 | ATPase epsilon subunit | 132 | Ch/Th | 5.83 | 14.49 | PS ATPase | 1.1.4 PS.lightreaction.ATP synthase | undefined | C | thylakoid-peripheral-stromal-side | ||
ATCG00490 | AtCg00490 | large subunit of RUBISCO. | 479 | Ch | 5.87 | 52.95 | metabolism carbon | 1.3.1 PS.calvin cyle.rubisco large subunit | other (e.g. cytoplasm) | C | plastid stroma | ||
ATCG00500 | AtCg00500 | Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis. | 488 | Ch/E/IM | 5.89 | 55.61 | metabolism lipid | 11.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation | undefined | C | plastid stroma | ||
ATCG00650 | AtCg00650 | chloroplast-encoded ribosomal protein S18 | 101 | Ch/S | 12.16 | 12.06 | translation stroma | plastid small ribosomal subunit & chloroplast | - | C | plastid ribosome | ||
ATCG00660 | AtCg00660 | encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex | 117 | Ch/S | 11.89 | 14.16 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | Y | C | plastid ribosome | |
ATCG00670 | AtCg00670 | Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described i | 196 | Ch/E & Ch/S | 4.97 | 22.09 | chaperone and protease | 29.5.5 protein.degradation.serine protease | other (e.g. cytoplasm) | C | plastid stroma; thylakoid-inner-peripheral-stromal-side | ||
ATCG00760 | AtCg00760 | encodes a chloroplast ribosomal protein L36, a constituent of the large subunit of the ribosomal complex | 37 | Ch/S | 11.91 | 4.46 | translation stroma | 29.2.1.1.1.2 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit | undefined | C | plastid ribosome | ||
ATCG00770 | AtCg00770 | chloroplast 30S ribosomal protein S8 | 134 | Ch/S | 10.93 | 15.48 | translation stroma | plastid small ribosomal subunit | - | C | plastid ribosome | ||
ATCG00790 | AtCg00790 | chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit | 135 | Ch/S | 11.62 | 15.29 | translation stroma | plastid large ribosomal subunit | - | C | plastid ribosome |